interstitialRedirectModalTitle

interstitialRedirectModalMessage

Green lynx spider and pitcher plants at the Splinter Hill Preserve in Minette, Alabama.
Pitch Perfect A green lynx spider traverses the slippery rim of a carnivorous pitcher plant in Bay Minette, Alabama. © Mac Stone
Magazine Articles

The Secret South

Alabama’s waterways conceal hidden worlds that are ancient, biodiverse and increasingly at risk.

Text by Lindsey Liles | Photographs by Mac Stone | Issue 4, 2025

Pretty Predators Twelve otherworldly species of carnivorous plants thrive in the seepage bogs of TNC’s Ruth McClellan Abronski Splinter Hill Bog Preserve. © Mac Stone
Full of Life The Mobile-Tensaw Delta is an area so biodiverse it’s been nicknamed the American Amazon. © Mac Stone

Outfitted with a snorkel and goggles, Ben Wegleitner dips his head underwater in Turkey Creek outside of Birmingham, Alabama, and pulls himself against the current in the 2-foot-deep water. Every so often, he surfaces to name the species he spots—an Alabama hog sucker, poking through leaf litter; a federally endangered rush darter, propped on its fins and resting; an Alabama shiner, a silvery blue flash among the rocks. Wegleitner is The Nature Conservancy’s urban watershed restoration specialist in Alabama and part of the team that helps protect these and hundreds of other rare species.

Most people don’t know it, but Alabama is a global hot spot for freshwater biodiversity. The density and variety of its life—and the work being done to protect it—starts in the southern Appalachian Mountains, the source of much of its water, and continues all the way down the state, following the flow across thousands of miles of waterways that run all the way to Mobile Bay.

Uncovering the Secret South (5:00) Join renowned conservation photographer Mac Stone on assignment for Nature Conservancy magazine as he ventures deep into Alabama’s wild rivers—lifelines for rare species and vibrant ecosystems. © Mac Stone
Alligator snapping turtle on the Coosa River, Alabama.
Gotcha In the Coosa River, an alligator snapping turtle opens the curved beak of its mouth, where a worm-like appendage on the tongue helps attract prey. These prehistoric ambush predators—which can weigh over 200 pounds—traverse river bottoms all over the Southeast. © Mac Stone
A gray tree frog perches on a plant in a swamp.
Swamp Neighbors A gray treefrog perches in front of the 87-foot-tall state-champion cypress tree hidden within the flooded forests of the Mobile-Tensaw Delta. This ultra-biodiverse system is a mosaic of cypress and tupelo swamps, bottomland hardwoods and marshes that meander to Mobile Bay. © Mac Stone
Flow State A network of rivers, creeks and wetlands threads through Alabama, shaping its biodiversity. © Mapping Specialists

This map of Alabama shows large networks of rivers and their location in proximity to the cities of Birmingham, Montgomery, and Mobile. In particular, the Cahaba River watershed, the Mobile-Tensaw River Delta, and Mobile Bay are highlighted.

Turkey Creek is cold even in the dead of summer. It’s part of the Black Warrior watershed, which is fed by mountain springs and streams, and supports its own set of unique, endemic life. Alabama is full of waterways like this, in total hosting more than 300 species of freshwater fish, 186 species of mussels, 31 species of turtles, 97 species of crayfish and 202 species of freshwater snails. But with around 100 extinctions (mostly of mussels and snail species) since colonial times, Alabama is one of the country’s leaders in losing its native wildlife. That makes TNC’s work to protect this expansive underwater world both vital and urgent.

As a whole, Alabama’s river systems are damaged and disconnected, says Jason Throneberry, TNC’s director of Alabama freshwater programs. In addition to pollution, sedimentation and development, thousands of dams disrupt the connectivity of the more than 132,000 miles of streams and rivers in the state, requiring TNC to take a landscape-scale approach to bypass or remove dams and restore connectivity.

The Cahaba River in the Cahaba River National Wildlife Refuge.
Basin Cahaba lilies thrive on the rocky shoals of the Cahaba River National Wildlife Refuge, where freshwater currents carve granite fissures. In spring, these ephemeral flowers erupt into brilliant white blooms, carpeting the river as far as the eye can see. © Mac Stone
Fungus clings to a branch on the Cahaba River, Alabama.
Branch Fungus grows from a branch on the Cahaba River, Alabama’s longest free-flowing river, which has more fish species per mile than any river of its size in North America. © Mac Stone
Basin Cahaba lilies thrive on the rocky shoals of the Cahaba River National Wildlife Refuge, where freshwater currents carve granite fissures. In spring, these ephemeral flowers erupt into brilliant white blooms, carpeting the river as far as the eye can see. © Mac Stone
Branch Fungus grows from a branch on the Cahaba River, Alabama’s longest free-flowing river, which has more fish species per mile than any river of its size in North America. © Mac Stone
Trees grow in high water in the Locust Fork River, Blountsville, Alabama.
Stream The water of the Locust Fork River tumbles around trees on its journey south to the Black Warrior River and Mobile River Basin. © Mac Stone
Convict caterpillars devour Cahaba lillies on the Little Cahaba River.
Stem Convict caterpillars munch on Cahaba lilies, one of the 70 imperiled species that live in the river these flowers are named for. © Mac Stone
Stream The water of the Locust Fork River tumbles around trees on its journey south to the Black Warrior River and Mobile River Basin. © Mac Stone
Stem Convict caterpillars munch on Cahaba lilies, one of the 70 imperiled species that live in the river these flowers are named for. © Mac Stone

“What we do up here in the headwaters around Birmingham impacts everything on down,” Wegleitner says. He and his colleague Alana Reynolds, a watershed coordinator at TNC, manage and work with partners on stream-bank protection and restoration projects that reduce the amount of sediment reaching the water. And they work with cities and private landowners to protect highly sensitive and localized species, like the federally endangered watercress darter, which has only a few remaining strongholds; one is on a golf course.

The water travels two main pathways down to the Gulf—the Alabama and the Tombigbee rivers. Life abounds in the tributaries. In the Cahaba River, for example—the state’s longest free-flowing river—a rare white lily blooms and prehistoric alligator snapping turtles ambush their prey. The Nature Conservancy has created three preserves along this Alabama River tributary, plus teamed up with state and federal agencies to create the Cahaba River National Wildlife Refuge.

Celestial crayfish (Procambarus holifieldi) in a tank at the Alabama Aquatic Biodiversity Center, Marion, Alabama.
Rare Crustacean The electric blue celestial crayfish is found only in Perry County. It is one of about 100 crayfish species found in Alabama. © Mac Stone
Year old and adult mussels in a tank at the Alabama Aquatic Biodiversity Center, Marion, Alabama.
Splashy Science Juvenile oyster mussels (above) sit on a tray at the Alabama Aquatic Biodiversity Center in Marion, Alabama, where aquatic biologist Paul Johnson is propagating them for reintroduction into the Paint Rock River, where they historically occurred but have been extirpated since the 1970s. © Mac Stone
Black fungus grows out of a log at the bottom of Neversink Cave Preserve, Fackler, Alabama.
The Dark Web At the bottom of a cave near the northern Alabama town of Fackler, tendrils of black fungus furl up from a decaying log. The cave’s dramatic 162-foot pit was carved over millions of years by flowing groundwater, which continues to shape the limestone and sustain the cave’s humid microclimate. © Mac Stone
Cave salamander on top of leaves in Neversink Cave Preserve, Alabama.
Cave dweller Many species rely on freshwater-fed refuges, including the bright orange, long-tailed cave salamander (above), the little brown bat, and the endangered Indiana bat. © Mac Stone

“There is this whole cascade of interconnected life,” says Throneberry. A self-identifying “river hippie and fish guy,” Throneberry spends hours on his boat, conducting both on-the-ground restoration and survey work, and landscape-level planning: He’s working to identify key dams that block animals’ passage and planning for how connectivity can be restored for all the species that need it, including mussels, whose larvae travel and disperse on the gills of host fish. His favorite place is the Mobile-Tensaw Delta, where the Alabama and Tombigbee rivers meet.

This delta is threaded by streams and home to towering cypress trees, alligators, fish and turtles like the Alabama red-bellied cooter. “This is the nexus for all these migratory species that we want to get back running up the rivers, too, like sturgeon and mullet,” Throneberry says, “a key piece of the puzzle.” The Nature Conservancy scored a major win here in February 2024 when it acquired nearly 8,000 acres in the heart of the delta. It has been named the E.O. Wilson Land Between the Rivers Preserve, after the legendary conservationist and Alabama native.

Coffee Island is a barrier island near Alabama.
Protective Barrier The damming, pollution and fragmentation of Alabama’s rivers—which disrupts natural sediment movement—starting all the way upstate have caused the islands’ shorelines to recede, which TNC and partners combat with renourishment projects. Barrier islands like Coffee Island improve coastal resilience by acting as buffers during storms. © Mac Stone
White ibis roosting at sunset on Marsh Island, Alabama.
Birds of a Feather White ibises nest in a large colony on Marsh Island in greater Mobile Bay. Marsh Island, Coffee Island, and others provide key habitat for shorebirds and seabirds like brown pelicans, black skimmers and terns to roost and nest. © Mac Stone

After passing through the delta, the water flows into the saltwater estuaries of Mobile Bay. Here, TNC’s Assistant Coastal Programs Director Mary Kate Brown leads and coordinates projects with partners like the National Oceanic and Atmospheric Administration and the National Fish and Wildlife Foundation to restore eroding shorelines and barrier islands, protecting key rookeries for nesting migratory seabirds and boosting coastal resilience.

From 1,000 feet up in a single-engine airplane, the barrier islands and Mobile Bay give way to the delta, a low-slung forest laced with serpentine waterways. Three egrets glide above the Alabama River, their flight path mirroring the bends of the water below. The birds fly north, where the delta rises into the uplands, and eventually on to the rolling foothills of the Appalachians and Turkey Creek with its colorful host of fish. This freshwater system is a mosaic of hidden life—delicate yet resilient, and ours to protect.

“Alabama is the epicenter of aquatic biodiversity in North America. The turtles, the fish, the crayfish, the mussels—this is the only place in the world where they can live and thrive,” says Throneberry. “The time to act is now.”

About the Creators

Lindsey Liles is a freelance journalist and editor for Garden & Gun magazine based in South Carolina.

Mac Stone is a conservation photographer based in South Carolina. His work has been published in National Geographic magazine and other publications.